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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791699.1_cds_XP_016508547.1_2088
CDS Infomation

[gene=LOC107826110] [db_xref=GeneID:107826110] [protein=phosphoribosylaminoimidazole carboxylase, chloroplastic-like] [protein_id=XP_016508547.1] [location=join(1715..1929,2415..2624,2695..2806,2937..2999,3097..3235,3584..3639,4531..4604,4724..4871,5065..5238,5827..5914,6023..6139,6793..6890,7003..7120,7202..7296,8095..8208)] [gbkey=CDS]
Sequence

ATGCTGAGCCTAAGCAACACTCTTCCAACAGTTTCTGGTCCTCAGAGAAGCAGTTTTGCC
TCTCCAATTTTAGCTGTCAATCCTCAAAAAAGTACCAGCTGCTTTAAAAATCACAGCTTT
GTGTTTTCATCATCTTTAATGAGACAACAATCTGAACACACCCCAACTATGTTGTCTTGC
AAAGCTTCTTTGGAAGTTGTAAAGGACTCACCCAGTTGTTCAGCAGTCCATGGAATATCG
GAAATGGTTGTGGGTGTTTTGGGAGGAGGGCAGCTGGGTCGTATGCTGTGTGAAGCGGCA
TCCCAGATGGCGATCAAAGTGATTGTCTTGGACCCAATGGAGAATTGTCCTGCTAGTGCA
CTAGCACATCAACATGTCGTGGGAAGCTATGATGACAGTGCCACTGTTGAAGAATTTGGG
AAAAGGTGTGGAGTACTAACCGTTGAGATCGAGCATGTTGATGTTGCCACACTAGAGAAG
CTTGAGCAACAAGGTGTGGATTGCCAACCCAAGGCTTCTACTATTCGTATAATCCAGGAT
AAATATCTTCAGAAGGTCCACTTTTCTCGTCATGCTATCCCACTTCCTAAGTTTATGCAG
ATTGATGATCTTGAAAGTGCTAGACGAGCAGGGGACCTGTTTGGTTATCCACTTATGATA
AAGAGCAGGAGATTGGCGTATGATGGTCGTGGCAATGCTGTAGCTAAAAGTGAGGAGGAG
CTGTCCTCTGCTGTTAATGTGCTTGGAGGATATGGTCGTGGTTTATATGTTGAGAAATGG
GCGCCATTTGTAAAGGAGCTCTCTGTGATTGTGGCTAGGGGAAGGGATAGTTCAATTGCA
TGTTACCCTGTTGTAGAAACTATTCACAGGGATAACATTTGTCATATCGTAAAGTCACCT
GCTAATGTATCTTGGAAGAGTATGAAACTTGCAACGGACGTTGCGCACATAGCTGTTAGT
TCATTAGAAGGTGCAGGAGTTTTCGCTGTTGAGTTGTTTTTGACAGAAGATGGTCAGATT
TTACTAAATGAAGTAGCTCCCAGACCTCATAATAGTGGGCATCACACCATTGAGGCTTGC
TTCACTTCACAATTCGAGCAACATTTGCGGGCTGTGGTTGGCCTTCCACTTGGTGATCCA
TCAATGAAAACTCCTGCTGCAGTCATGTATAACATATTGGGGGAAGATGATGGCGAACCT
GGATTTCTTTTAGCTAATCAACTTATTGGAAGAGCATTGGGAATTCCGGGGGCATCTATT
CATTGGTATGACAAGCCAGAGATGCGAAGGCAACGCAAGATGGGACACATCACAATAGTT
GGCCCTTCTATGGGCATTGTGGAAGCTCAGCTAAGGGTGATTCTAAATGAAGGAAGTGTT
AATGGCCAGCCTGCAGTTGCACCACGTGTTGGGATCATAATGGGATCTGATTCAGATCTT
CCTGTTATGAAGGATGCTGCCAAGATTTTAAAAGAGTTTGATGTGCCTGCTGAAGTAAAA
ATAGTTTCAGCCCACCGTACACCTGAGATGATGTTTTCCTACGCTTTGTCTGCGCGGGAA
CGTGGTATTCAAGTAATAATTGCTGGTGCTGGTGGTGCCGCCCACTTACCTGGAATGGTT
GCTGCATTGACTCCACTACCTGTTATTGGCGTTCCAGTACGCGCTTCCACATTAGACGGA
CTTGACTCCCTATTGTCCATTGTTCAGATGCCAAGAGGGGTCCCAGTTGCAACAGTTGCA
ATAAACAACGCCACAAATGCTGGTCTGCTGGCAGTAAGATTGTTAGGGATCAGCGACATA
AAGTTGCAAGCTAGGTATTGA

Peptide Sequence

PEP ID

XP_016508547.1
PEP Infomation

PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Nicotiana tabacum]
Sequence

MLSLSNTLPTVSGPQRSSFASPILAVNPQKSTSCFKNHSFVFSSSLMRQQSEHTPTMLSC
KASLEVVKDSPSCSAVHGISEMVVGVLGGGQLGRMLCEAASQMAIKVIVLDPMENCPASA
LAHQHVVGSYDDSATVEEFGKRCGVLTVEIEHVDVATLEKLEQQGVDCQPKASTIRIIQD
KYLQKVHFSRHAIPLPKFMQIDDLESARRAGDLFGYPLMIKSRRLAYDGRGNAVAKSEEE
LSSAVNVLGGYGRGLYVEKWAPFVKELSVIVARGRDSSIACYPVVETIHRDNICHIVKSP
ANVSWKSMKLATDVAHIAVSSLEGAGVFAVELFLTEDGQILLNEVAPRPHNSGHHTIEAC
FTSQFEQHLRAVVGLPLGDPSMKTPAAVMYNILGEDDGEPGFLLANQLIGRALGIPGASI
HWYDKPEMRRQRKMGHITIVGPSMGIVEAQLRVILNEGSVNGQPAVAPRVGIIMGSDSDL
PVMKDAAKILKEFDVPAEVKIVSAHRTPEMMFSYALSARERGIQVIIAGAGGAAHLPGMV
AALTPLPVIGVPVRASTLDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVRLLGISDI
KLQARY

Transcript Sequence

Gene sequence data has not been registered.